TABLE 1 

Summarized statistics for transcriptome assembly of Candida auris, alignment rate of raw reads to transcriptome, and summary of Trinotate functional annotation

CategoryValue
No. of reads
    Total414,364,539
    After trimming411,626,529
Total no. of assembled bases11,593,681
GC content, %45.35
Total no. by Trinity
    “Genes”5,848
    “Transcripts”5,889
Contig (bp)
    N503,488
    Median1,308
    Avg1,983
No. of reads aligned (%)
    1 time393,124,946 (95.51)
    >1 time9,368,727 (2.28)
    Overall402,493,673 (97.78)
Functional annotation, no. of transcripts
    Swiss-Prot matches, BLASTx3,200
    Swiss-Prot unique proteins, BLASTx3,176
    Swiss-Prot matches, BLASTp3,041
    Swiss-Prot unique proteins, BLASTp3,019
    TMHMM701
    SignalP202
    Gene Ontology3,085
    KEGG2,889