TABLE 3

Modal codon usage of H. marinus chromosomes and regions of gene content difference within each chromosome

ComparisonSequence 1Sequence 2Distance between
sequence modes
Distance between modes of
shuffled sequences
Whole chromosomesBE01SJ0.02410.0402 ± 0.0049
BE01 regionsRegion AChromosome (excluding regions A and B)0.35890.1047 ± 0.0117
Region BChromosome (excluding regions A and B)0.29760.1149 ± 0.0171
Region ARegion B0.26070.1429 ± 0.0257
SJ regionsRegion AChromosome (excluding regions A and B)0.37560.0985 ± 0.0092
Region BChromosome (excluding regions A and B)0.22370.0913 ± 0.0133
Region ARegion B0.30530.1385 ± 0.0166