TABLE 3

Virus sequences identified in pooled RNA-seq data from 179 patients positive for EBOV based on qRT-PCR and clinical diagnosis

VirusProtein% identityAmino acid lengthE value
EBOVL protein96.82,2120.00E+0
GB-CPolyprotein99.13281.50E−190
HHV-4BALF21001001.9E−51
LF2 protein1001664.9E−91
BALF598.81724.4E−88
BALF41002576.6E−142
DNA polymerase catalytic subunit99.21312.3E−71
BHRF11001217.4E-66
BARF099.21206.5E−62
Early antigen D1001182E−60
gp110 precursor100951.3E−49
A73 protein100946.1E−50
LF198.9921.1E−48
Putative BHLF1 protein98.7754.8E−42
BFRF1100714.1E−32
BMRF2100687.6E−31
dUTPase98.5683E−32
BFRF2100674.2E−32
LF3 protein100450.0000000000000002
K15100370.00000000000056
HHV-5 (cytomegalovirus)IRL41001073.1E−53
IRL394.11011.20E−46
IRL7100821.60E−37
RL5A63.6669.30E−15
IRL555.1693.50E−12
UL10968.1472.10E−10
Hepatitis A virusPolyprotein100915.5E−45
Hepatitis B virusPolymerase92.85033.30E−278
Pepino mosaic virusReplicase99.41634.60E−87
Sewage-associated gemycircularvirus-4Replication-associated protein1001053.60E−57
Rotavirus AVP698.8868.1E−41
VP1100751.1E−33
NSP31692511.5E−21
PapillomavirusMinor structural protein- interacting protein100563.40E−24
L297.2721.50E−34
Regulatory protein98.5675E−30
Torque Teno virus 20Unnamed protein product100329.10E−9
Tobacco mosaic virusReplicase97.21,5210.00E+0
Capsid protein1001027.2E−49
126-kDa protein993142.30E−181
Movement protein97.42688.60E−145