TABLE 2

Exemplary data on the variety of microorganisms identified in pooled RNA-seq data from 179 patients positive for EBOV based on qRT-PCR

OrganismProtein% identityAlignmentE value
Escherichia coli G58-1Glycosyl transferase family 21005830.00E+0
Lactobacillus fermentumDNA-directed RNA polymerase subunit beta1007220.00E+0
Wohlfahrtiimonas chitiniclasticaHypothetical protein, partial1005830.00E+0
Plasmodium falciparum UGT5.1Hypothetical protein C923_003281005114.50E−298
Candida albicans WO-1Acetyl coenzyme A carboxylase1005042.50E−293
Streptococcus pneumoniae EU-NP04Transposase DDE domain protein1004932.90E−292
Myroides spp.GMP synthase1005083.20E−292
Haemophilus influenzaePhosphoribosylformylglycinamidine synthase1005001.80E−289
Acinetobacter baumannii AB307-02942-Isopropylmalate synthase1004791.20E−276
Providencia rettgeri DSM 1131DNA polymerase III subunit alpha1004839.70E−276
Plasmodium falciparum Vietnam Oak-KnollHypothetical protein PFFVO_045021004762.20E−270
Ureaplasma urealyticumCell division protein FtsH1004788.20E−264
Lactobacillus fermentum6-Phosphogluconate dehydrogenase1004573.70E−260
Plasmodium falciparum Tanzania (2000708)Hypothetical protein PFTANZ_033151004505.70E−260
Streptococcus sanguinisCollagen-binding protein1004392.80E−251
Acinetobacter baumanniiPutrescine/spermidine ABC transporter1004445.10E−251
Haemophilus haemolyticusCatalase1004158.40E−250
Plasmodium falciparum 3D7Elongation factor 1 alpha1004334.60E−249
Plasmodium falciparum MaliPS096_E11Histidine-tRNA ligase1004031.10E−235
Myroides spp.Multispecies collagenase1004136.20E−232
Plasmodium falciparum Tanzania (2000708)ATP-dependent protease HslVU, ATPase subunit1004102.10E−229
Campylobacter spp.Multispecies GTP-binding protein1004075.10E−228
Streptococcus parasanguinisAmino acid transporter1004028.80E−228
Haemophilus parainfluenzael,d-Transpeptidase1003933.80E−224
Escherichia coliLeucyl-tRNA synthetase1003839.40E−224
Myroides spp.Diaminopimelate decarboxylase1003889.30E−223
Myroides odoratimimusTonB-dependent receptor1003891.80E−222