TABLE 2

Representative body site microbiota abundance levels

PhylotypeaPhylotype abundanceb
NoseOropharynxInguinalPerianalAbscess
Actinobacteria 44.6310.9359.4547.043.96
 Corynebacterium 32.260.6251.9039.223.31
 Rothia 0.226.690.580.550.01
 Propionibacterium 6.75<0.010.370.303.36
 Brevibacterium 0.03<0.011.611.77<0.01
Firmicutes 41.9749.3331.5642.0379.05
 Staphylococcus 28.510.0117.119.5672.54
 Streptococcus 0.5931.320.421.020.13
 Anaerococcus 2.410.058.3110.871.20
 Finegoldia 0.30<0.012.486.842.51
 Dolosigranulum 8.85<0.01<0.01<0.01<0.01
 Gemella 0.095.87<0.010.05<0.01
 Veillonella 0.034.56<0.010.03<0.01
 Peptoniphilus 0.50<0.010.221.790.81
Proteobacteria 12.7623.394.924.8812.81
 Rhodanobacter 5.730.772.491.936.88
 Neisseria 0.1510.86<0.010.04<0.01
 Haemophilus 0.588.340.010.090.01
 Pseudomonas 2.020.210.730.873.36
 Acidocella 0.890.110.400.310.94
 Moraxella 1.380.550.010.01<0.01
Bacteroidetes 0.2213.173.695.373.21
 Prevotella 0.036.090.171.600.88
 Porphyromonas 0.043.730.342.162.18
Fusobacteria <0.011.07<0.010.010.84
 Fusobacterium <0.010.83<0.010.010.82
  • a Phylum-level phylotypes are shown in bold and italics. Genus-level phylotypes are shown in italics.

  • b Values represent average phylotype abundance levels for all participants.