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Research Article | Host-Microbe Biology

Genomic Epidemiology and Evolution of Escherichia coli in Wild Animals in Mexico

Robert Murphy, Martin Palm, Ville Mustonen, Jonas Warringer, Anne Farewell, Leopold Parts, Danesh Moradigaravand
Maria L. Marco, Editor
Robert Murphy
aUniversity of Copenhagen, Department of Biology, Section for Ecology and Evolution, Copenhagen, Denmark
bCenter for Computational Biology, Institute of Cancer and Genomic Sciences, University of Birmingham, Birmingham, United Kingdom
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Martin Palm
cDepartment for Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden
dCentre for Antibiotic Resistance Research at the University of Gothenburg, Gothenburg, Sweden
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  • ORCID record for Martin Palm
Ville Mustonen
eOrganismal and Evolutionary Biology Research Programme, Department of Computer Science, Institute of Biotechnology, University of Helsinki, Helsinki, Finland
fHelsinki Institute for Information Technology, Helsinki, Finland
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Jonas Warringer
cDepartment for Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden
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Anne Farewell
cDepartment for Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden
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Leopold Parts
gWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire, United Kingdom
hDepartment of Computer Science, University of Tartu, Tartu, Estonia
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Danesh Moradigaravand
bCenter for Computational Biology, Institute of Cancer and Genomic Sciences, University of Birmingham, Birmingham, United Kingdom
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  • ORCID record for Danesh Moradigaravand
Maria L. Marco
University of California, Davis
Roles: Editor
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DOI: 10.1128/mSphere.00738-20
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Article Information

DOI 
https://doi.org/10.1128/mSphere.00738-20
PubMed 
33408222

Published By 
American Society for Microbiology Journals
History 
  • Received July 22, 2020
  • Accepted December 11, 2020
  • Published online January 6, 2021.

Copyright & Usage 
Copyright © 2021 Murphy et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.
Editors and / or Reviewers 
  • Maria L. Marco, Editor, University of California, Davis

Author Information

  1. Robert Murphya,b,
  2. Martin Palmc,d,
  3. Ville Mustonene,f,
  4. Jonas Warringerc,
  5. Anne Farewellc,
  6. Leopold Partsg,h and
  7. Danesh Moradigaravandb
  1. aUniversity of Copenhagen, Department of Biology, Section for Ecology and Evolution, Copenhagen, Denmark
  2. bCenter for Computational Biology, Institute of Cancer and Genomic Sciences, University of Birmingham, Birmingham, United Kingdom
  3. cDepartment for Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden
  4. dCentre for Antibiotic Resistance Research at the University of Gothenburg, Gothenburg, Sweden
  5. eOrganismal and Evolutionary Biology Research Programme, Department of Computer Science, Institute of Biotechnology, University of Helsinki, Helsinki, Finland
  6. fHelsinki Institute for Information Technology, Helsinki, Finland
  7. gWellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire, United Kingdom
  8. hDepartment of Computer Science, University of Tartu, Tartu, Estonia
  • Address correspondence to Leopold Parts, leopold.parts{at}sanger.ac.uk, or Danesh Moradigaravand, d.moradigaravand{at}bham.ac.uk.
  • Citation Murphy R, Palm M, Mustonen V, Warringer J, Farewell A, Parts L, Moradigaravand D. 2021. Genomic epidemiology and evolution of Escherichia coli in wild animals in Mexico. mSphere 6:e00738-20. https://doi.org/10.1128/mSphere.00738-20.

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Genomic Epidemiology and Evolution of Escherichia coli in Wild Animals in Mexico
Robert Murphy, Martin Palm, Ville Mustonen, Jonas Warringer, Anne Farewell, Leopold Parts, Danesh Moradigaravand
mSphere Jan 2021, 6 (1) e00738-20; DOI: 10.1128/mSphere.00738-20

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Genomic Epidemiology and Evolution of Escherichia coli in Wild Animals in Mexico
Robert Murphy, Martin Palm, Ville Mustonen, Jonas Warringer, Anne Farewell, Leopold Parts, Danesh Moradigaravand
mSphere Jan 2021, 6 (1) e00738-20; DOI: 10.1128/mSphere.00738-20
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KEYWORDS

Escherichia coli
genomic epidemiology
host-pathogen interaction
infectious diseases
whole-genome sequencing
wild animals

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