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Research Article | Ecological and Evolutionary Science

Microbial Community Succession and Nutrient Cycling Responses following Perturbations of Experimental Saltwater Aquaria

Holly M. Bik, Alexandra Alexiev, Sabreen K. Aulakh, Lakshmi Bharadwaj, Jennifer Flanagan, John M. Haggerty, Sarah M. Hird, Guillaume Jospin, Jenna M. Lang, Laura A. Sauder, Josh D. Neufeld, Andrew Shaver, Akshay Sethi, Jonathan A. Eisen, David A. Coil
Katherine McMahon, Editor
Holly M. Bik
aUC Davis Genome Center, University of California—Davis, Davis, California, USA
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Alexandra Alexiev
aUC Davis Genome Center, University of California—Davis, Davis, California, USA
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Sabreen K. Aulakh
aUC Davis Genome Center, University of California—Davis, Davis, California, USA
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Lakshmi Bharadwaj
aUC Davis Genome Center, University of California—Davis, Davis, California, USA
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Jennifer Flanagan
aUC Davis Genome Center, University of California—Davis, Davis, California, USA
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John M. Haggerty
bDepartment of Biology, San Diego State University, San Diego, California, USA
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Sarah M. Hird
aUC Davis Genome Center, University of California—Davis, Davis, California, USA
cDepartment of Molecular and Cell Biology, University of Connecticut, Storrs, Connecticut, USA
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Guillaume Jospin
aUC Davis Genome Center, University of California—Davis, Davis, California, USA
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Jenna M. Lang
aUC Davis Genome Center, University of California—Davis, Davis, California, USA
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Laura A. Sauder
dDepartment of Biology, University of Waterloo, Waterloo, Ontario, Canada
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Josh D. Neufeld
dDepartment of Biology, University of Waterloo, Waterloo, Ontario, Canada
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Andrew Shaver
aUC Davis Genome Center, University of California—Davis, Davis, California, USA
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Akshay Sethi
aUC Davis Genome Center, University of California—Davis, Davis, California, USA
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Jonathan A. Eisen
eDepartment of Evolution and Ecology, University of California—Davis, Davis, California, USA
fDepartment of Medical Microbiology and Immunology, University of California—Davis, Davis, California, USA
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David A. Coil
aUC Davis Genome Center, University of California—Davis, Davis, California, USA
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Katherine McMahon
University of Wisconsin—Madison
Roles: Editor
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DOI: 10.1128/mSphere.00043-19
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Article Information

DOI 
https://doi.org/10.1128/mSphere.00043-19
PubMed 
30787117

Published By 
American Society for Microbiology Journals
History 
  • Received January 18, 2019
  • Accepted January 30, 2019
  • Published online February 20, 2019.

Copyright & Usage 
Copyright © 2019 Bik et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.
Editors and / or Reviewers 
  • Katherine McMahon, Editor, University of Wisconsin—Madison

Author Information

  1. Holly M. Bik*,a,
  2. Alexandra Alexieva,
  3. Sabreen K. Aulakha,
  4. Lakshmi Bharadwaja,
  5. Jennifer Flanagana,
  6. John M. Haggertyb,
  7. Sarah M. Hirda,c,
  8. Guillaume Jospina,
  9. Jenna M. Langa,
  10. Laura A. Sauderd,
  11. Josh D. Neufeldd,
  12. Andrew Shavera,
  13. Akshay Sethia,
  14. Jonathan A. Eisene,f and
  15. David A. Coila
  1. aUC Davis Genome Center, University of California—Davis, Davis, California, USA
  2. bDepartment of Biology, San Diego State University, San Diego, California, USA
  3. cDepartment of Molecular and Cell Biology, University of Connecticut, Storrs, Connecticut, USA
  4. dDepartment of Biology, University of Waterloo, Waterloo, Ontario, Canada
  5. eDepartment of Evolution and Ecology, University of California—Davis, Davis, California, USA
  6. fDepartment of Medical Microbiology and Immunology, University of California—Davis, Davis, California, USA
  • Address correspondence to Jonathan A. Eisen, jaeisen{at}ucdavis.edu.
  • ↵* Present address: Holly M. Bik, Department of Nematology, University of California—Riverside, Riverside, California, USA.

  • Citation Bik HM, Alexiev A, Aulakh SK, Bharadwaj L, Flanagan J, Haggerty JM, Hird SM, Jospin G, Lang JM, Sauder LA, Neufeld JD, Shaver A, Sethi A, Eisen JA, Coil DA. 2019. Microbial community succession and nutrient cycling responses following perturbations of experimental saltwater aquaria. mSphere 4:e00043-19. https://doi.org/10.1128/mSphere.00043-19.

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Microbial Community Succession and Nutrient Cycling Responses following Perturbations of Experimental Saltwater Aquaria
Holly M. Bik, Alexandra Alexiev, Sabreen K. Aulakh, Lakshmi Bharadwaj, Jennifer Flanagan, John M. Haggerty, Sarah M. Hird, Guillaume Jospin, Jenna M. Lang, Laura A. Sauder, Josh D. Neufeld, Andrew Shaver, Akshay Sethi, Jonathan A. Eisen, David A. Coil
mSphere Feb 2019, 4 (1) e00043-19; DOI: 10.1128/mSphere.00043-19

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Microbial Community Succession and Nutrient Cycling Responses following Perturbations of Experimental Saltwater Aquaria
Holly M. Bik, Alexandra Alexiev, Sabreen K. Aulakh, Lakshmi Bharadwaj, Jennifer Flanagan, John M. Haggerty, Sarah M. Hird, Guillaume Jospin, Jenna M. Lang, Laura A. Sauder, Josh D. Neufeld, Andrew Shaver, Akshay Sethi, Jonathan A. Eisen, David A. Coil
mSphere Feb 2019, 4 (1) e00043-19; DOI: 10.1128/mSphere.00043-19
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KEYWORDS

16S rRNA gene
bacteria
community succession
metabarcoding
saltwater aquarium
water chemistry

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