Ecological and Evolutionary Science
Research Article | Ecological and Evolutionary ScienceUnder-the-Radar Dengue Virus Infections in Natural Populations of Aedes aegypti MosquitoesSince 1999, dengue outbreaks in the continental United States involving local transmission have occurred only episodically and only in Florida and Texas. In Florida, these episodes appear to be coincident with increased introductions of dengue virus into the region through human travel and migration from countries where the disease is endemic. To date, the U.S. public health response to dengue outbreaks has been largely reactive, and...
Observation | Ecological and Evolutionary ScienceDisruption of Cross-Feeding Inhibits Pathogen Growth in the Sputa of Patients with Cystic FibrosisAntibiotic efficacy achieved in vitro correlates poorly with clinical outcomes after treatment of chronic polymicrobial diseases; if a pathogen demonstrates susceptibility to a given antibiotic in the lab, that compound is often ineffective when administered clinically. Conversely, if a pathogen is resistant in vitro, patient treatment with that same compound can elicit a positive response. This discordance suggests...
Research Article | Ecological and Evolutionary SciencePhylogenomic Insights into Diversity and Evolution of Nonpathogenic Xanthomonas Strains Associated with CitrusXanthomonas citri is one of the top phytopathogenic bacteria and is the causal agent of citrus canker. Interestingly, Xanthomonas is also reported to be associated with healthy citrus plants. The advent of the genomic era enabled us to carry out a detailed evolutionary study of a Xanthomonas community associated with citrus and other plants. Our...
Research Article | Ecological and Evolutionary ScienceDiversity of Secondary Metabolism in Aspergillus nidulans Clinical IsolatesMuch of what we know about the genetics underlying secondary metabolite (SM) production and the function of SMs in the model fungus Aspergillus nidulans comes from a single reference genome. A growing body of research indicates the importance of biosynthetic gene cluster (BGC) and SM diversity within a species. However, there is no information about the natural...
Research Article | Ecological and Evolutionary ScienceInsights into the Host Range, Genetic Diversity, and Geographical Distribution of JingmenvirusesSeveral arboviruses emerging as new pathogens for humans and domestic animals have recently raised public health concern and increased interest in the study of their host range and in detection of spillover events. Recently, a new group of segmented Flaviviridae-related viruses, the Jingmenviruses, has been identified worldwide in many invertebrate and vertebrate hosts, pointing out the issue of whether they belong to the...
Research Article | Ecological and Evolutionary ScienceOptimization of a Method To Quantify Soil Bacterial Abundance by Flow CytometryThe ability to quantify bacterial abundance is important for understanding the contributions of microbial communities in soils, but such assays remain difficult and time-consuming. Flow cytometry offers a fast and direct way to count bacterial cells, but several concerns remain in applying the technique to soils. This study aimed to improve the efficiency of the method for soil while quantifying its limitations. We demonstrated that an...
Research Article | Ecological and Evolutionary ScienceAlteration of Prion Strain Emergence by Nonhost FactorsThe prion strain, surface type, and matrix containing PrPSc can influence PrPSc surface adsorption. The cumulative effect of these factors can result in strain- and soil-specific differences in prion bioavailability. Environmental weathering processes can result in decreases in PrPSc conversion efficiency and infectivity. Little is known about how incomplete inactivation of surface-bound PrPSc...
Commentary | Ecological and Evolutionary SciencemSphere of Influence: the Wild Genetic Diversity of Our Closest Yeast CompanionsDouda Bensasson uses the population genomics of model yeast species to understand how wild yeast colonize new environments, such as humans or their food. In this mSphere of Influence article, she reflects on how the discovery of “Surprisingly diverged populations of Saccharomyces cerevisiae in natural environments remote from human activity” (Q.-M. Wang, W.-Q. Liu, G...
Research Article | Ecological and Evolutionary ScienceGenomic Variation among Strains of Crithidia bombi and C. expoekiA group of trypanosomatid flagellates includes several well-studied medically and economically important parasites of vertebrates and plants. Nevertheless, the vast majority of trypanosomatids infect only insects (mostly flies and true bugs) and, because of that, has attracted little research attention in the past. Of several hundred trypanosomatid species, only four can infect bees (honeybees and bumblebees). Because of such scarcity,...
Research Article | Ecological and Evolutionary ScienceRobust Archaeal and Bacterial Communities Inhabit Shallow Subsurface Sediments of the Bonneville Salt FlatsPleistocene Lake Bonneville, which covered a third of Utah, desiccated approximately 13,000 years ago, leaving behind the Bonneville Salt Flats (BSF) in the Utah West Desert. The potash salts that saturate BSF basin are extracted and sold as an additive for agricultural fertilizers. The salt crust is a well-known recreational and economic commodity, but the biological interactions with the salt crust have not been studied. This study is...